BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002D02LP1|AL424948
(163 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 309 1e-84
>3x_Contig1619
Length = 7770
Score = 309 bits (154), Expect = 1e-84
Identities = 159/163 (97%)
Strand = Plus / Plus
Query: 1 atctatgaaaccaatttatgatccatctaaacctcatgaatataattatagaagcmcctm 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2651 atctatgaaaccaatttatgatccatctaaacctcatgaatataattatagaagcccctc 2710
Query: 61 gcggctcatccaaccgtacggttgnatgatgccgcgagggggaagatacagaaagtattc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2711 gcggctcatccaaccgtacggttggatgatgccgcgagggggaagatacagaaagtattc 2770
Query: 121 taagtaattacctaccataggtagaataatgattawaaataaa 163
||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2771 taagtaattacctaccataggtagaataatgattataaataaa 2813
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 857
Number of Sequences: 1807
Number of extensions: 857
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 163
length of database: 10,358,551
effective HSP length: 15
effective length of query: 148
effective length of database: 10,331,446
effective search space: 1529054008
effective search space used: 1529054008
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 49 (98.8 bits)